Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTGCCTGTGTGTTAGA
..((((((((((..(((((((.&))))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001077690
GeneSymbolALG9
Binding site3359,3378
Score0.872
Seed1
Au0.456
Energy-18.9
Binding len19
Me-7.103
Phylopstem0.49535090000000004
Phylopflank0.50804827575
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure