Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGATAATTTTTAATAGCCTTTGATCATGGGGTGAGTGA
((((.(((((..(((((((...&)))))))........................))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077692
GeneSymbolALG9
Binding site5451,5493
Score0.923
Seed0
Au0.588
Energy-23.4
Binding len42
Me-14.228
Phylopstem5.760827428571429
Phylopflank4.767144515
Longest consecutive pairings7
Position of longest consecutive pairings35
Pairings in 3prime end5
Position3UTR
2D Structure