Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGCTCTCAGGGAGGCCTTGGCGGTCTAAGTCTGACCACAGAGCCAGTT
.(((((((((((((((((((((&))))...))))))))))..........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077693
GeneSymbolECSCR
Binding site166,217
Score0.923
Seed1
Au0.441
Energy-22.9
Binding len51
Me-3.793
Phylopstem0.504555568
Phylopflank0.6229762087500001
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end8
PositionCDS
2D Structure