Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTTGCAACTGTCTCTCTGATGTGTGCCT
....((((((((.(((((((((&))))))))).............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001078171
GeneSymbolRTL8C
Binding site1057,1088
Score0.846
Seed0
Au0.574
Energy-15.6
Binding len31
Me-10.836
Phylopstem0.3417118
Phylopflank0.271265595
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end8
Position3UTR
2D Structure