Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACATCAGGAAGGAGAGCCCCCTGCTCAATGATTACCGGG
..(((((((((((((((((((.&)))).)))))))))))....................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001078172
GeneSymbolRTL8A
Binding site272,313
Score0.846
Seed1
Au0.426
Energy-22.9
Binding len41
Me-4.957
Phylopstem-0.28374473499999997
Phylopflank0.4818595025
Longest consecutive pairings11
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure