Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTGAACGACCTATTTGGTGGAGTGGTGTATGCCGGGA
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001079533
GeneSymbolCPEB1
Binding site1287,1327
Score1.0
Seed1
Au0.544
Energy-19.6
Binding len13
Me-6.908
Phylopstem2.409717090909091
Phylopflank2.9609330350000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure