Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTGAACGACCTATTTGGTGGAGTGGTGTATGCCGGGA
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001079534
GeneSymbolCPEB1
Binding site1272,1312
Score0.923
Seed1
Au0.544
Energy-19.6
Binding len13
Me-6.908
Phylopstem2.669206
Phylopflank3.309079808749999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure