Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTAGAGAGGGGAAGAGAAATGTGTTCTCCAGG
..((((((((((((((((((((&))))))))))))))))................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001079670
GeneSymbolCAB39L
Binding site2733,2770
Score0.923
Seed1
Au0.529
Energy-28.9
Binding len37
Me-4.957
Phylopstem5.144865407222223
Phylopflank4.81551933475
Longest consecutive pairings16
Position of longest consecutive pairings21
Pairings in 3prime end8
Position3UTR
2D Structure