Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTCGACCCGGAAGACAGGGCTCGTGAGCAGCGGCGGCAGCTGCA
.(((((((((.(((((.....&.))))).)))))))))
Details
MiRNAhsa-miR-5047
RefseqIDXM_047416026
GeneSymbolUVSSA
Binding site2155,2203
Score0.846
Seed1
Au0.282
Energy-25.1
Binding len16
Me-6.618
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings0
Pairings in 3prime end3
Position3UTR
2D Structure