Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCGGGAGGGCTGCCAGTT
.((((((.(((((((((((...&)))))))))))..)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001079843
GeneSymbolCASZ1
Binding site4222,4242
Score0.923
Seed1
Au0.412
Energy-26.3
Binding len20
Me-6.107
Phylopstem4.134988181818182
Phylopflank5.1189298975
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure