Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCACAGCTC
....(((((.(((((..((((&))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047416067
GeneSymbolSCOC
Binding site2711,2727
Score0.923
Seed0
Au0.5
Energy-18.7
Binding len16
Me-11.022
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure