Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTGTGGCTGCCAGGTC
((((((((..((..((......&))..))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001079870
GeneSymbolHAP1
Binding site3281,3298
Score0.923
Seed1
Au0.338
Energy-17.7
Binding len17
Me-8.382
Phylopstem0.604605975
Phylopflank0.7737499350000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure