Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGTGGTGTGTCTCCTCTCCCTCCCTCCCTCTTCTGCCAGTGG
(((((((.((...(((((((((&))))))))).)).............................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001079870
GeneSymbolHAP1
Binding site3585,3634
Score0.846
Seed1
Au0.324
Energy-25.0
Binding len49
Me-13.712
Phylopstem-0.2761431444444445
Phylopflank-0.07424552500000002
Longest consecutive pairings9
Position of longest consecutive pairings40
Pairings in 3prime end8
Position3UTR
2D Structure