Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTGTGGCTGCCAGGTC
((((((((..((..((......&))..))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001079871
GeneSymbolHAP1
Binding site3257,3274
Score0.846
Seed1
Au0.338
Energy-17.7
Binding len17
Me-8.382
Phylopstem0.28400747499999995
Phylopflank1.39615304875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure