Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAGAGGGGACACATCCAGCCTAAGGTATGATTTTCGCTACAGTGA
((((((((((((((((((((..&)))))))))))))..........................))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001079871
GeneSymbolHAP1
Binding site1315,1364
Score0.846
Seed1
Au0.456
Energy-25.6
Binding len49
Me-3.938
Phylopstem-0.43380822916666667
Phylopflank-0.3413084562499997
Longest consecutive pairings13
Position of longest consecutive pairings36
Pairings in 3prime end6
PositionCDS
2D Structure