Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGGACCCCCAGAAAGGAGGAGTGG
((((..((((((((((((....&.)))))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001079877
GeneSymbolRASA4
Binding site4139,4165
Score1.0
Seed0
Au0.485
Energy-27.6
Binding len19
Me-9.958
Phylopstem2.23961475
Phylopflank1.6770570675000003
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure