Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGAGCAAGTCACCTGGGAGGGCTTACAGGTGCCATAATGAAGGCCTGGGGCACTGTGGTAGTGA
(((((((((((((((((((.((&.)))))))))))))....................))))..............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001079900
GeneSymbolSPACA5B
Binding site23,90
Score0.846
Seed1
Au0.426
Energy-18.8
Binding len57
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings43
Pairings in 3prime end7
Position5UTR
2D Structure