Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGGGAGCCCGGACGTCCAAAGAGATGTCTTCTGGGAGCCACTGG
((.((((((((.(((((((...&.)))))))....................)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080114
GeneSymbolLDB3
Binding site2518,2565
Score0.846
Seed0
Au0.382
Energy-23.9
Binding len40
Me-8.842
Phylopstem0.42777921249999995
Phylopflank0.09443691625
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure