Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCGGTAAGCCAGGAGGGAGCACAGG
..(((((((((((((((.(...&.).)))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080142
GeneSymbolCT47A5
Binding site304,332
Score0.846
Seed1
Au0.279
Energy-27.3
Binding len20
Me-4.957
Phylopstem0.18982956249999997
Phylopflank-0.16338161725
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure