Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAATTTTCCAAATCTTGGGAGGAGCCTGTGA
(((.((((((((((.((((...&.)))).)))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080209
GeneSymbolTMEM200C
Binding site5069,5103
Score1.0
Seed0
Au0.603
Energy-25.2
Binding len21
Me-7.705
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure