Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080383
GeneSymbolGJC1
Binding site4848,4869
Score0.846
Seed1
Au0.412
Energy-24.2
Binding len21
Me-10.109
Phylopstem-0.3786742727272728
Phylopflank-0.02459916250000002
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure