Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTAAATTCAGAAAATTTAATTTTCATAGTAGGCCAGGTG
(((((((.(((.(((.(((((.&.))))).))).))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080392
GeneSymbolDENND11
Binding site6355,6397
Score0.923
Seed1
Au0.706
Energy-19.5
Binding len23
Me-9.831
Phylopstem3.666433285714286
Phylopflank4.962084450000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure