Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAAAAGGGGCCAGTGC
(((((((((((((.(((((...&)))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080395
GeneSymbolAATK
Binding site4640,4659
Score1.0
Seed1
Au0.353
Energy-27.5
Binding len19
Me-4.794
Phylopstem2.601249230769231
Phylopflank3.034776667500001
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure