Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCGCCAGGACCGTGGACTTCTGGAGGGCAGAGAGGGTGCCC
....((((((((((((((((((&)))))).........................))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080397
GeneSymbolSLC45A1
Binding site1328,1373
Score0.846
Seed0
Au0.338
Energy-22.0
Binding len45
Me-9.547
Phylopstem1.134399806818182
Phylopflank2.30919821875
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure