Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGTCATTGCTGAAGTTTATTCTCAGATCTGCCAGGTC
((((((((.....((.(((...&.)))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080401
GeneSymbolPPM1N
Binding site1198,1236
Score1.0
Seed1
Au0.5
Energy-16.1
Binding len19
Me-13.93
Phylopstem0.49741755
Phylopflank0.6333791074999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure