Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGGTGCCAGGA
.((((((((....(((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080414
GeneSymbolCCDC88C
Binding site6294,6308
Score0.846
Seed1
Au0.426
Energy-18.2
Binding len14
Me-12.497
Phylopstem4.759296125
Phylopflank3.4024198125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure