Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCTCCTTGCCAGGG
.(((((((......((((....&)))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080419
GeneSymbolUNK
Binding site2999,3016
Score0.846
Seed1
Au0.324
Energy-17.2
Binding len17
Me-14.41
Phylopstem0.6468274285714285
Phylopflank0.2579440355
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure