Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCGAGAAGGGGGTCGGG
..(((((((((((((.(((...&))).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080424
GeneSymbolKDM6B
Binding site5513,5531
Score1.0
Seed1
Au0.294
Energy-27.4
Binding len18
Me-5.19
Phylopstem1.383875153846154
Phylopflank1.5810637737499997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure