Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGGGGGGAGGCAGG
..(((.((((((((((((....&)))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080431
GeneSymbolSLC45A4
Binding site5625,5642
Score0.923
Seed0
Au0.353
Energy-27.1
Binding len17
Me-6.858
Phylopstem0.2541995333333333
Phylopflank1.624522985
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure