Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAAGGAGAACCTTTGTTACTCTAGAAAACAGTGT
(((((.(((((((((((((...&))))))))))))).....................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080432
GeneSymbolFTO
Binding site10421,10461
Score0.846
Seed0
Au0.588
Energy-26.2
Binding len40
Me-5.839
Phylopstem0.23833061538461536
Phylopflank-0.25296572
Longest consecutive pairings13
Position of longest consecutive pairings27
Pairings in 3prime end5
Position3UTR
2D Structure