Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACTGAGGTCAGGAGCCCCTGAGCAGTGG
(((((((((((.(((.(((.((&))))).)))..))))))).......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346404
GeneSymbolPGAP2
Binding site1283,1313
Score0.846
Seed1
Au0.426
Energy-20.9
Binding len30
Me-7.517
Phylopstem0.5770671033333334
Phylopflank0.35458584024999995
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure