Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTTTCGCTATGTTGGCCAGGC
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080435
GeneSymbolWHAMM
Binding site3220,3243
Score0.923
Seed1
Au0.529
Energy-18.2
Binding len16
Me-8.406
Phylopstem-0.083346375
Phylopflank-0.12448806249999989
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure