Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACTCTGTCGCCCAGGCTGGGGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080435
GeneSymbolWHAMM
Binding site2709,2742
Score0.846
Seed1
Au0.338
Energy-26.4
Binding len22
Me-10.109
Phylopstem0.04157427272727272
Phylopflank-0.01669697000000003
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure