Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGTGCCT
....(((..(((((((((....&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080439
GeneSymbolHSF5
Binding site3364,3377
Score0.923
Seed0
Au0.632
Energy-15.6
Binding len13
Me-12.917
Phylopstem2.1198266444444442
Phylopflank2.5525842287500002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure