Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAGCCAGCTGGAGCCAC
...(((((((...((((.(((.&))).))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080439
GeneSymbolHSF5
Binding site1410,1428
Score0.846
Seed0
Au0.515
Energy-23.8
Binding len18
Me-13.975
Phylopstem2.193718857142857
Phylopflank1.58160118125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure