Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCGGGCAGGAAGGGGCCC
....((((((((((((((((..&))))...)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080442
GeneSymbolSLC38A8
Binding site1566,1586
Score0.846
Seed0
Au0.324
Energy-24.2
Binding len20
Me-9.547
Phylopstem-0.33973705263157894
Phylopflank-0.46204886875000006
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure