Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTTTCCCTTCTGCTCTGGTGCCAGGG
.((((((((.((..(((((...&.)))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080450
GeneSymbolBEND3
Binding site3769,3798
Score0.846
Seed1
Au0.441
Energy-22.3
Binding len19
Me-7.182
Phylopstem4.332031625000001
Phylopflank5.283121145000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure