Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCGGAAGGTTACTCTCCGGTGACCATGGGCTCTGGCTCAGTGA
((((((((.(((((((((((((&))))))))))))).........................))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080479
GeneSymbolARHGEF28
Binding site358,406
Score1.0
Seed1
Au0.426
Energy-23.9
Binding len48
Me-4.994
Phylopstem1.6912753230769229
Phylopflank1.7268512124999997
Longest consecutive pairings13
Position of longest consecutive pairings35
Pairings in 3prime end8
PositionCDS
2D Structure