Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGTCAAGGTGCAGTGA
((((((((.((((((((((...&))))))))))....))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080481
GeneSymbolUSP45
Binding site5652,5676
Score0.846
Seed1
Au0.441
Energy-22.3
Binding len24
Me-4.994
Phylopstem3.6200813999999992
Phylopflank3.16480157
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure