Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080488
GeneSymbolONECUT3
Binding site4333,4356
Score0.923
Seed1
Au0.426
Energy-28.9
Binding len23
Me-10.109
Phylopstem0.08596854545454545
Phylopflank0.042525299999999974
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure