Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGAACGAGTACTCAGTGG
(((((((((.(((((((((...&)))))))))..))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080494
GeneSymbolTTC39A
Binding site1482,1506
Score0.846
Seed1
Au0.529
Energy-23.8
Binding len24
Me-5.18
Phylopstem4.102004411111111
Phylopflank4.133711024375
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end5
PositionCDS
2D Structure