Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACAAACTGACCATTGGCTGCCAGCGTG
((((((((..((((((((((..&))))))).........)))..)))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080496
GeneSymbolRGP1
Binding site543,574
Score0.846
Seed1
Au0.515
Energy-18.6
Binding len31
Me-6.236
Phylopstem5.142953310526316
Phylopflank4.4297607700000015
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end6
PositionCDS
2D Structure