Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCGGCCGCCCAGGGAGCCCAGTGG
((((((((((...((((((...&.)))))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080505
GeneSymbolSHISA3
Binding site540,567
Score0.923
Seed1
Au0.294
Energy-26.8
Binding len19
Me-11.398
Phylopstem0.6855112727272727
Phylopflank0.8389330900000002
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure