Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCCTCGGGGCCGGTT
.(((((((((...((((((...&))))))....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080509
GeneSymbolTSPAN11
Binding site2434,2454
Score0.923
Seed1
Au0.353
Energy-26.1
Binding len20
Me-11.254
Phylopstem-0.4865196111111112
Phylopflank-0.30501234825
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure