Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCCCCTCGGCCAGGTT
(((((((.......((((....&)))).......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080522
GeneSymbolCC2D2A
Binding site3517,3536
Score0.846
Seed1
Au0.485
Energy-16.5
Binding len19
Me-16.868
Phylopstem4.219412285714285
Phylopflank3.1181379
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure