Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCAGGAGGAAGCCCTCTCTCTTGCACAGGTGA
((((((((.((((((.((((((&)))))))))))).))))..............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080523
GeneSymbolARRDC5
Binding site1095,1131
Score0.923
Seed1
Au0.426
Energy-21.9
Binding len36
Me-5.227
Phylopstem0.2313037363636364
Phylopflank0.7439637775000001
Longest consecutive pairings12
Position of longest consecutive pairings24
Pairings in 3prime end7
Position3UTR
2D Structure