Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGCGATGTCAGGA
.((((((((....(((((....&)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001080528
GeneSymbolC3orf84
Binding site213,230
Score0.846
Seed1
Au0.353
Energy-18.2
Binding len17
Me-12.497
Phylopstem0.5814851125
Phylopflank1.077240385
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure