Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCACCAATGAAAGAGAGGAGCAGCGGG
..(((((((((((((.......&.))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080545
GeneSymbolPPP1R1C
Binding site553,580
Score1.0
Seed1
Au0.529
Energy-18.5
Binding len17
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end1
PositionCDS
2D Structure