Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGACAAGGCAGGGTGG
((((....(((((((((((...&))))))).))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080551
GeneSymbolSHOC1
Binding site29,49
Score0.846
Seed0
Au0.559
Energy-20.2
Binding len20
Me-13.815
Phylopstem0.9342390833333335
Phylopflank0.13621385546052633
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
Position5UTR
2D Structure