Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGAAGAGAGTGTCAGTT
.((((((((.(((((((((...&))))))))).))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001080551
GeneSymbolSHOC1
Binding site3875,3896
Score1.0
Seed1
Au0.618
Energy-19.0
Binding len21
Me-5.036
Phylopstem0.4698342555555555
Phylopflank0.6235490237500001
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure